CDS

Accession Number TCMCG016C09173
gbkey CDS
Protein Id OMO86038.1
Location complement(join(9544..10054,10288..10418,10867..10967,11103..11185,11331..11430,11843..12008,12109..12168,12275..12348,12442..12514,12611..12662,12749..12876,13131..13204,13530..13755))
Organism Corchorus capsularis
locus_tag CCACVL1_09835

Protein

Length 592aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009519.1
Definition XPG/Rad2 endonuclease [Corchorus capsularis]
Locus_tag CCACVL1_09835

EGGNOG-MAPPER Annotation

COG_category L
Description Flap endonuclease GEN-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K15338        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004520        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008821        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016889        [VIEW IN EMBL-EBI]
GO:0016894        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGGTGAAGAATTTGTGGGATATTTTGGAATCATGCAAGAAAACTTTGCCTCTTCATTATCTCCAGAACAAAAGGGTATGTGTCGATCTGTCTTGTTGGATGGTTCAACTTCAAAACGTGAACAAATCTCATTGCCCCATGAAAGACAAGGTTTATCTCAAGAGTCTCTTTCACCGCCTCAGAGCTCTTATTGCCTTGAACTGTAGCCTTATTTTTGTCACTGATGGTTCAATCCCTGCAATCAAATTAGCTACATACAGGCGGCGTTTAAACTCGGGAAGTGAGGTAGAGAATCAAGTTACTCAGGAGGGTATAAATTCAAAAAAGTTGTCTTCACTTAGAAGGAATATGGGATCTGAATTCTCATGCATGATCAAAGAAGCAAAAGTCCTTGGATTAGCACTTGGAATTCCCTGCTTAGATGGGATTGAGGAAGCTGAAGCGCAATGTGCATTATTAAACTTAGAATCATTATGTGATGGGTGTTTCTCTTCTGATTCAGATATCTTCCTTTTTGGTGCAAGAACAGTCTACAGAGACATTTGTGTTGGGGAAGGAGGTCATGTTGTTTGCTATGAAATGGCTGATATAGAGCAAAAACTTGGATTTGGAAGGAACTCCTTGATAACTCTGGCCCTTCTTCTTGGCAGTGATTATTCTCATGGTGTTCATGGTCTGGGTCCGGGGTCAGCATGCAAGATTGTTAAATCAGTTGGAGACAAGGATATTCTTCAAAAAATTGTATCAGAAGGATTGTCTTTTGCAAAAAAGACAAAAAATTCAAAAAACCAGGGTCGAGCAAAGTGCAATGACAATGCAACCACATTGCATCACGAAGTGAGCATAAATGGAAGCAATCACAATTTACAAAGAGATAATCAGTGTTTGCAAGTGGTGGAAGCATATATGAAGCCCAAGTGCCACTCAGCAGATTCTGATGTGGTCCACAGCGTTCTTGCGCAGCATCCATTTCAGCGTGAGCAACTTCATCAGCTATGTGCTCAGCTCTTTGACTGGCCCCCTGATAAAACAGATGAATACATCCTTCCTAAGATTGCTGAAAGAAATTTACGACGGTTTGCCAAATTGCGCTCAACCTCGTCTCTGTTAGGTGTTGACATTCCACTAAAGGAGATACCGGTTAAGTGTCCTGTATCAGCAATTATTAAGTGCCGAAAAGCTCATGGAAAAGAATGTTTTGAGGTGTCATGGGATGAGCTAGATGGAATTAAAACCTCTGTAGTTTCAGCAGATCTCATAGAGAGTGCCTGTCCTGAAAAGATCAAAGAGTTTGAAGATAGAAGAGCTTTGGAGAAGAAAAATCACCGTAAACCAAGACCAAAGAAATCAGAACAAAAATGTTCAATGGCCGAAATAGATCTGAAATTCAAAGATCTGTTGCTTGACACTGAGTTAGGAAGCAAGTCTGTTACCATTGCTTCAAGGGAAGTGATATCAGGCAAAATGATCACAGCACCTGAGGGTAATTCCGTATACCAAGGCCTCAATGTTATTTTGGAGTCAGAATGCAACGATGACCGCAAAAATGCAGCATTAAGCCCACAAACTAGTACAATTGCCCCAAAGCATGAAGTTGTTGATCTTTTGAGCCCCTCTCCTCAAGTGCTCTCCCAGAATGTTTTCAGGTATACTAAAATGAATGGTCAAAACATTAGTGTGATTGATTTGAGTGATTCAGAAACTGAGAGTTCACCCGAACATGCGAAGAAAGCTAGAGAGCTTAGATTGTTTTTGGCTAGCATTCGAGATAAATGA
Protein:  
MGVKNLWDILESCKKTLPLHYLQNKRVCVDLSCWMVQLQNVNKSHCPMKDKVYLKSLFHRLRALIALNCSLIFVTDGSIPAIKLATYRRRLNSGSEVENQVTQEGINSKKLSSLRRNMGSEFSCMIKEAKVLGLALGIPCLDGIEEAEAQCALLNLESLCDGCFSSDSDIFLFGARTVYRDICVGEGGHVVCYEMADIEQKLGFGRNSLITLALLLGSDYSHGVHGLGPGSACKIVKSVGDKDILQKIVSEGLSFAKKTKNSKNQGRAKCNDNATTLHHEVSINGSNHNLQRDNQCLQVVEAYMKPKCHSADSDVVHSVLAQHPFQREQLHQLCAQLFDWPPDKTDEYILPKIAERNLRRFAKLRSTSSLLGVDIPLKEIPVKCPVSAIIKCRKAHGKECFEVSWDELDGIKTSVVSADLIESACPEKIKEFEDRRALEKKNHRKPRPKKSEQKCSMAEIDLKFKDLLLDTELGSKSVTIASREVISGKMITAPEGNSVYQGLNVILESECNDDRKNAALSPQTSTIAPKHEVVDLLSPSPQVLSQNVFRYTKMNGQNISVIDLSDSETESSPEHAKKARELRLFLASIRDK